The present 3D Dataset contains the 3D models analyzed in: Hirose, A., Nakashima, T., Yamada, S., Uwabe, C., Kose, K., Takakuwa, T. 2012. Embryonic liver morphology and morphometry by magnetic resonance microscopic imaging.  Anat Rec (Hoboken) 295, 51-59. doi: 10.1002/ar.21496 

Homo sapiens KC-CS14LIV1387 View specimen

M3#64 Human liver at Carnegie Stage (CS) 14 Type: "3D_surfaces" doi: 10.18563/m3.sf.64   state:published

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Homo sapiens KC-CS15LIV5074 View specimen

M3#65 Human liver at Carnegie Stage (CS) 15 Type: "3D_surfaces" doi: 10.18563/m3.sf.65   state:published

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Homo sapiens KC-CS16LIV2578 View specimen

M3#66 Human liver at Carnegie Stage (CS) 16 Type: "3D_surfaces" doi: 10.18563/m3.sf.66   state:published

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Homo sapiens KC-CS17LIV17832 View specimen

M3#67 Human liver at Carnegie Stage (CS) 17 Type: "3D_surfaces" doi: 10.18563/m3.sf.67   state:published

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Homo sapiens KC-CS18LIV21124 View specimen

M3#68 Human liver at Carnegie Stage (CS) 18 Type: "3D_surfaces" doi: 10.18563/m3.sf.68   state:published

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Homo sapiens KC-CS19LIV14353 View specimen

M3#69 Human liver at Carnegie Stage (CS) 19 Type: "3D_surfaces" doi: 10.18563/m3.sf.69   state:published

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Homo sapiens KC-CS20LIV20701 View specimen

M3#70 Human liver at Carnegie Stage (CS) 20 Type: "3D_surfaces" doi: 10.18563/m3.sf.70   state:published

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Homo sapiens KC-CS21LIV25858 View specimen

M3#71 Human liver at Carnegie Stage (CS) 21 Type: "3D_surfaces" doi: 10.18563/m3.sf.71   state:published

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Homo sapiens KC-CS22LIV22226 View specimen

M3#72 Human liver at Carnegie Stage (CS) 22 Type: "3D_surfaces" doi: 10.18563/m3.sf.72   state:published

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Homo sapiens KC-CS23LIV25704 View specimen

M3#73 Human liver at Carnegie Stage (CS) 23 Type: "3D_surfaces" doi: 10.18563/m3.sf.73   state:published

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This contribution contains 3D models of mandibles of Cypriot mice (Mus cypriacus) and house mice (Mus musculus domesticus) from the island of Cyprus. The niche partitioning of the two species was investigated using isotopic ecology, geometric morphometrics and biomechanics. Both species displayed generalist feeding behavior, modulated by fine-tuned adaptation to their feeding habits. The house mouse mandible, with a relatively large masseter area and an optimization for incisor biting, appears as an all-rounder tool for foraging on diverse non-natural items.
These models are analyzed in the following publication: Renaud et al 2024, “Trophic differentiation between the endemic Cypriot mouse and the house mouse: a study coupling stable isotopes and morphometrics”, https://doi.org/10.1007/s10914-024-09740-5
  

Mus cypriacus Cypriacus_5GE View specimen

M3#1584 3D model of the right mandible Type: "3D_surfaces" doi: 10.18563/m3.sf.1584   state:published

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Mus cypriacus Cypriacus_BET2 View specimen

M3#1585 3D model of the right mandible Type: "3D_surfaces" doi: 10.18563/m3.sf.1585   state:published

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Mus cypriacus Cypriacus_FON1 View specimen

M3#1586 3D model of the right mandible Type: "3D_surfaces" doi: 10.18563/m3.sf.1586   state:published

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Mus cypriacus Cypriacus_FON2 View specimen

M3#1587 3D model of the right mandible Type: "3D_surfaces" doi: 10.18563/m3.sf.1587   state:published

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Mus cypriacus Cypriacus_KOU1 View specimen

M3#1588 3D model of the right mandible Type: "3D_surfaces" doi: 10.18563/m3.sf.1588   state:published

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Mus musculus Cyprus_dom_KOF1 View specimen

M3#1589 3D model of the right mandible Type: "3D_surfaces" doi: 10.18563/m3.sf.1589   state:published

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Mus musculus Cyprus_dom_LEF1 View specimen

M3#1590 3D model of the right mandible Type: "3D_surfaces" doi: 10.18563/m3.sf.1590   state:published

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Mus musculus Cyprus_dom_MEN1 View specimen

M3#1591 3D model of the right mandible Type: "3D_surfaces" doi: 10.18563/m3.sf.1591   state:published

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Mus musculus Cyprus_dom_TSE2 View specimen

M3#1592 3D model of the mirrored left mandible Type: "3D_surfaces" doi: 10.18563/m3.sf.1592   state:published

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Mus musculus Cyprus_dom_XYL5 View specimen

M3#1593 3D model of the right mandible Type: "3D_surfaces" doi: 10.18563/m3.sf.1593   state:published

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The present 3D Dataset contains the 3D models of a skull and lower jaw of the holotype of Santagnathus mariensis, described in “Old fossil findings in the Upper Triassic rocks of southern Brazil improve diversity of traversodontid cynodonts (Therapsida, Cynodontia)” 

Santagnathus mariensis UFRGS-PV-1419-T View specimen

	M3#1157 Skull Type: "3D_surfaces" doi: 10.18563/m3.sf.1157   state:published	Download 3D surface file
	M3#1158 Lower jaw Type: "3D_surfaces" doi: 10.18563/m3.sf.1158   state:published	Download 3D surface file

The present 3D Dataset contains the 3D models of the holotype mandible and referred fragmented skull of the new species Amphimoschus xishuiensis analyzed in the article Li, Y.-K., Mennecart, B., Aiglstorfer, M., Ni, X.-J., Li, Q., Deng, T. 2021. The early evolution of cranial appendages in Bovoidea revealed by new species of Amphimoschus (Mammalia: Ruminantia) from China. Zoological Journal of the Linnean Society https://doi.org/10.1093/zoolinnean/zlab053 

Amphimoschus xishuiensis IVPP V 25521.1 View specimen

M3#803 the holotype, a right hemimandible with tooth row p2 to m3 Type: "3D_surfaces" doi: 10.18563/m3.sf.803   state:published

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Amphimoschus xishuiensis IVPP V 25521.2 View specimen

M3#804 referred material, anterior part of a skull with right P4-M3 and left P3-M2 Type: "3D_surfaces" doi: 10.18563/m3.sf.804   state:published

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This contribution contains the 3D models described and figured in the following publication: Paulina-Carabajal, A. and Nieto, M. N. In press. Brief comment on the brain and inner ear of Giganotosaurus carolinii (Dinosauria: Theropoda) based on CT scans. Ameghiniana. https://doi.org/10.5710/AMGH.25.10.2019.3237
  

Giganotosaurus carolinii MUCPv-CH-1 View specimen

M3#504 The current file contents 3D models of the braincase, brain, left and right inner ears Type: "3D_surfaces" doi: 10.18563/m3.sf.504   state:published

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The present 3D Dataset contains the 3D model analyzed in Vautrin et al. (2019), Palaeontology, From limb to fin: an Eocene protocetid forelimb from Senegal sheds new light on the early locomotor evolution of early cetaceans. 

?Carolinacetus indet. SNTB 2011-01 View specimen

M3#398 3D model of an articulated forelimb of a Carolinacetus-like protocetid from Senegal Type: "3D_surfaces" doi: 10.18563/m3.sf.398   state:published

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The present 3D Dataset contains the 3D models analyzed in: Kaigai N et al. Morphogenesis and three-dimensional movement of the stomach during the human embryonic period, Anat Rec (Hoboken). 2014 May;297(5):791-797. doi: 10.1002/ar.22833. 

Homo sapiens KC-CS16STM27159 View specimen

M3#56 computationally reconstructed stomach of the human embryo (M3#56_KC-CS16STM27159) at Carnegie Stage 16 (Crown Rump Length= 9.9mm). Type: "3D_surfaces" doi: 10.18563/m3.sf56   state:published

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Homo sapiens KC-CS17STM20383 View specimen

M3#57 computationally reconstructed stomach of the human embryo (M3#57_KC-CS17STM20383) at Carnegie Stage 17 (Crown Rump Length= 12.3mm). Type: "3D_surfaces" doi: 10.18563/m3.sf57   state:published

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Homo sapiens KC-CS18STM21807 View specimen

M3#58 computationally reconstructed stomach of the human embryo (M3#58_KC-CS18STM21807) at Carnegie Stage 18 (Crown Rump Length= 14.7mm). Type: "3D_surfaces" doi: 10.18563/m3.sf58   state:published

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Homo sapiens KC-CS19STM17998 View specimen

M3#59 computationally reconstructed stomach of the human embryo (M3#59_KC-CS19STM17998) at Carnegie Stage 19 (Crown Rump Length was unmeasured ). Type: "3D_surfaces" doi: 10.18563/m3.sf59   state:published

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Homo sapiens KC-CS20STM20785 View specimen

M3#60 computationally reconstructed stomach of the human embryo (M3#60_KC-CS20STM20785) at Carnegie Stage 20 (Crown Rump Length= 18.7 mm). Type: "3D_surfaces" doi: 10.18563/m3.sf60   state:published

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Homo sapiens KC-CS21STM24728 View specimen

M3#61 computationally reconstructed stomach of the human embryo (M3#61_KC-CS21STM24728) at Carnegie Stage 21 (Crown Rump Length= 20.9 mm). Type: "3D_surfaces" doi: 10.18563/m3.sf61   state:published

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Homo sapiens KC-CS22STM26438 View specimen

M3#62 computationally reconstructed stomach of the human embryo (M3#62_KC-CS22STM26438) at Carnegie Stage 22 (Crown Rump Length= 21.5 mm). Type: "3D_surfaces" doi: 10.18563/m3.sf62   state:published

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Homo sapiens KC-CS23STM20018 View specimen

M3#63 computationally reconstructed stomach of the human embryo (M3#63_KC-CS23STM20018) at Carnegie Stage 23 (Crown Rump Length= 23.1 mm). Type: "3D_surfaces" doi: 10.18563/m3.sf63   state:published

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This contribution contains the 3D models described and figured in the following publication: Shiraishi N et al. Morphology and morphometry of the human embryonic brain: A three-dimensional analysis NeuroImage 115, 2015, 96-103, DOI: 10.1016/j.neuroimage.2015.04.044.

  

Homo sapiens KC-CS13BRN50455 View specimen

M3#24 Computationally reconstructed cerebral parenchyma and ventricle of the human embryo at Carnegie Stage 13. Type: "3D_surfaces" doi: 10.18563/m3.sf24   state:published

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Homo sapiens KC-CS14BRN18834 View specimen

M3#25 Computationally reconstructed cerebral parenchyma and ventricle of the human embryo at Carnegie Stage 14. Type: "3D_surfaces" doi: 10.18563/m3.sf25   state:published

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Homo sapiens KC-CS15BRN19975 View specimen

M3#26 Computationally reconstructed cerebral parenchyma and ventricle of the human embryo at Carnegie Stage 15. Type: "3D_surfaces" doi: 10.18563/m3.sf26   state:published

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Homo sapiens KC-CS16BRN7870 View specimen

M3#27 Computationally reconstructed cerebral parenchyma and ventricle of the human embryo at Carnegie Stage 16. Type: "3D_surfaces" doi: 10.18563/m3.sf27   state:published

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Homo sapiens KC-CS17BRN26702 View specimen

M3#28 Computationally reconstructed cerebral parenchyma and ventricle of the human embryo at Carnegie Stage 17. Type: "3D_surfaces" doi: 10.18563/m3.sf28   state:published

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Homo sapiens KC-CS18BRN25914 View specimen

M3#29 Computationally reconstructed cerebral parenchyma and ventricle of the human embryo at Carnegie Stage 18. Type: "3D_surfaces" doi: 10.18563/m3.sf29   state:published

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Homo sapiens KC-CS19BRN16508 View specimen

M3#30 Computationally reconstructed cerebral parenchyma and ventricle of the human embryo at Carnegie Stage 19. Type: "3D_surfaces" doi: 10.18563/m3.sf30   state:published

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Homo sapiens KC-CS20BRN26581 View specimen

M3#31 Computationally reconstructed cerebral parenchyma and ventricle of the human embryo at Carnegie Stage 20. Type: "3D_surfaces" doi: 10.18563/m3.sf31   state:published

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Homo sapiens KC-CS21BRN33434 View specimen

M3#32 Computationally reconstructed cerebral parenchyma and ventricle of the human embryo at Carnegie Stage 21. Type: "3D_surfaces" doi: 10.18563/m3.sf32   state:published

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Homo sapiens KC-CS22BRN27960 View specimen

M3#33 Computationally reconstructed cerebral parenchyma and ventricle of the human embryo at Carnegie Stage 22. Type: "3D_surfaces" doi: 10.18563/m3.sf33   state:published

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Homo sapiens KC-CS23BRN28189 View specimen

M3#34 Computationally reconstructed cerebral parenchyma and ventricle of the human embryo at Carnegie Stage 23. Type: "3D_surfaces" doi: 10.18563/m3.sf34   state:published

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The present 3D Dataset contains the 3D model analyzed in Wazir, W. A., Sehgal, R. K., Čerňanský, A., Patnaik, R., Kumar, N., Singh, A. P. and Singh, N. P. 2022. A find from the Ladakh Himalaya reveals a survival of madtsoiid snakes (Serpentes, Madtsoiidae) in India through the late Oligocene. Journal of Vertebrate Paleontology, 41(6), e2058401. https://doi.org/10.1080/02724634.2021.2058401
  

indet. indet. WIMF/A 4816 View specimen

M3#1754 Vertebra Type: "3D_surfaces" doi: 10.18563/m3.sf.1754   state:published

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This contribution contains the 3D models described and figured in the following publication: Pujos F., Hautier L., Antoine P-O., Boivin M., Moison B, Salas-Gismondi R, Tejada J.V. , Varas-Malca R.M., Yans J., Marivaux L. (2025). Unexpected pampatheriid from the early Oligocene of Peruvian Amazonia: insights into the tropical differentiation of cingulate xenarthrans. Historical Biology. 

Bradypus tridactylus UM-ZOOL-V69 View specimen

M3#1600 Molariform and associated dentinal microstructure Type: "3D_surfaces" doi: 10.18563/m3.sf.1600   state:published

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Choloepus didactylus UM-ZOOL-V12 View specimen

M3#1601 Molariform and associated dentinal microstructure Type: "3D_surfaces" doi: 10.18563/m3.sf.1601   state:published

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Dasypus mexicanus UM-ZOOL-2787 View specimen

M3#1602 Molariform and associated dentinal microstructure Type: "3D_surfaces" doi: 10.18563/m3.sf.1602   state:published

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Tolypeutes matacus UM-ZOOL-2789 View specimen

M3#1603 Molariform and associated dentinal microstructure Type: "3D_surfaces" doi: 10.18563/m3.sf.1603   state:published

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Euphractus sexcinctus UM-ZOOL-2790 View specimen

M3#1604 Molariform and associated dentinal microstructure Type: "3D_surfaces" doi: 10.18563/m3.sf.1604   state:published

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Holmesina septrionalis UM-FLD-1 View specimen

M3#1605 Molariform and associated dentinal microstructure Type: "3D_surfaces" doi: 10.18563/m3.sf.1605   state:published

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Megatherium sp. UM-TAR-1 View specimen

M3#1607 Molariform and associated dentinal microstructure Type: "3D_surfaces" doi: 10.18563/m3.sf.1607   state:published

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Indet indet MUSM-3965 View specimen

M3#1606 Molariform and associated dentinal microstructure Type: "3D_surfaces" doi: 10.18563/m3.sf.1606   state:published

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The present 3D Dataset contains the 3D model of the endocranial cast of Palaeolama sp. from the mid-Pleistocene (~1.2 Mya) of South America, analyzed in Balcarcel et al. 2023.
  

Palaeolama sp. PIMUZ A/V 4091 View specimen

M3#1128 3D model of a natural endocast Type: "3D_surfaces" doi: 10.18563/m3.sf.1128   state:published

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Turtles are one of the most impressive vertebrates. Much of the body is either hidden in a shell or can be drawn into it. Turtles impress with their individual longevity and their often peaceful disposition. Also, with their resilience, they have survived all extinction events since their emergence in the Late Triassic. Today's diversity of shapes is impressive and ranges from the large and high domed Galapagos turtles to the hamster-sized flat pancake turtles. The holotype of one of the oldest fossil turtles, Proganochelys quenstedtii, is housed in the paleontological collection in Tübingen/Germany. Since its discovery some years before 1873, P. quenstedtii has represented the 'prototype' of the turtle and has had an eventful scientific history. It was found in Neuenhaus (Häfner-Neuhausen in Schönbuch forest), Baden-Württemberg, Germany, and stems from Löwenstein-Formation (Weißer Keupersandstein), Late Triassic. The current catalogue number is GPIT-PV-30000. The specimen is listed in the historical inventory “Tübinger Petrefaktenverzeichnis 1841 bis 1896, [folio 326v.]“, as “[catalogue number: PV]16549, Schildkröte Weiser Keupersandstein Hafnerhausen” [turtle from White Keuper Sandstone]. Another, more recent synonym is “GPIT/RE/9396”. The same specimen was presented as uncatalogued by Gaffney (1990). Here we provide a surface scan of the steinkern for easier access of this famous specimen to the scientific community.
  

Proganochelys quenstedtii GPIT-PV-30000 View specimen

M3#967 This the surface model of the steinkern of the shell of Proganochelys quenstedtii. Type: "3D_surfaces" doi: 10.18563/m3.sf.967   state:published

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The present 3D Dataset contains the 3D models analyzed in Pochat-Cottilloux Y., Martin J.E., Jouve S., Perrichon G., Adrien J., Salaviale C., de Muizon C., Cespedes R. & Amiot R. (2021). The neuroanatomy of Zulmasuchus querejazus (Crocodylomorpha, Sebecidae) and its implications for the paleoecology of sebecosuchians. The Anatomical Record, https://doi.org/10.1002/ar.24826 

Zulmasuchus querejazus MHNC 6672 View specimen

	M3#798 Left endosseous labyrinth of Z. querejazus (MHNC 6672). Type: "3D_surfaces" doi: 10.18563/m3.sf.798   state:published	Download 3D surface file
	M3#799 Reconstruction of the endocranial cavities of Z. querejazus (MHNC 6672). Type: "3D_surfaces" doi: 10.18563/m3.sf.799   state:published	Download 3D surface file
	M3#800 Three-dimensional reconstruction of the pneumatic cavities within the braincase of Z. querejazus (MHNC 6672) Type: "3D_surfaces" doi: 10.18563/m3.sf.800   state:published	Download 3D surface file

The present 3D Dataset contains the 3D models analyzed in Mennecart B., Wazir W.A., Sehgal R.K., Patnaik R., Singh N.P., Kumar N, and Nanda A.C. 2021. New remains of Nalamaeryx (Tragulidae, Mammalia) from the Ladakh Himalaya and their phylogenetical and palaeoenvironmental implications. Historical Biology. https://doi.org/10.1080/08912963.2021.2014479
  

Nalameryx savagei WIMF/A4801 View specimen

M3#766 Nalameryx savagei, Partial lower right jaw preserving m2 and m3. Type: "3D_surfaces" doi: 10.18563/m3.sf.766   state:published

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Nalameryx savagei WIMF/A4802 View specimen

M3#767 Nalameryx savagei, partial lower right jaw preserving m2 and m3 Type: "3D_surfaces" doi: 10.18563/m3.sf.767   state:published

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The present 3D Dataset contains the 3D models analyzed in Hendrickx, C., Gaetano, L. C., Choiniere, J., Mocke, H. and Abdala, F. in press. A new traversodontid cynodont with a peculiar postcanine dentition from the Middle/Late Triassic of Namibia and dental evolution in basal gomphodonts. Journal of Systematic Palaeontology. 

Etjoia dentitransitus GSN F1591 View specimen

	M3#557 Surface model derived from µCT data of the holotype of Etjoia dentitransitus Type: "3D_surfaces" doi: 10.18563/m3.sf.557   state:published	Download 3D surface file
	M3#558 Photogrammetric 3D surface model of the postcanines of the Holotype of Etjoia dentitransitus Type: "3D_surfaces" doi: 10.18563/m3.sf.558   state:published	Download 3D surface file
	M3#559 Photogrammetric 3D surface model of the Holotype of Etjoia dentitransitus Type: "3D_surfaces" doi: 10.18563/m3.sf.559   state:published	Download 3D surface file

This note presents the 3D model of the hemi-mandible UM-PAT 159 of the MP7 Diacodexis species D. cf. gigasei and 3D models corresponding to the restoration of the ascending ramus, broken on the original specimen, and to a restoration of a complete mandible based on the preserved left hemi-mandible.  

Diacodexis cf. gigasei UMPAT159 View specimen

	M3#315 3D models of UM PAT 159 after the restoration of the ascending ramus Type: "3D_surfaces" doi: 10.18563/m3.sf.315   state:published	Download 3D surface file
	M3#316 restoration of a complete mandible based on the preserved left hemi-mandible UM PAT 159 Type: "3D_surfaces" doi: 10.18563/m3.sf.316   state:published	Download 3D surface file
	M3#317 3D model of the hemi-mandible UM PAT 159 Type: "3D_surfaces" doi: 10.18563/m3.sf.317   state:published	Download 3D surface file

The present 3D Dataset contains the 3D models of the holotype (NMB Sth. 833) of the new species Micromeryx? eiselei analysed in the article Aiglstorfer, M., Costeur, L., Mennecart, B., Heizmann, E.P.J.. 2017. Micromeryx? eiselei - a new moschid species from Steinheim am Albuch, Germany, and the first comprehensive description of moschid cranial material from the Miocene of Central Europe. PlosOne https://doi.org/10.1371/journal.pone.0185679 

Micromeryx? eiselei NMB Sth. 833 View specimen

M3#284 The 3 D surfaces comprises the skull, petrosal, and bony labyrinth of NMB Sth.833, the holotype of Micromeryx? eiselei Type: "3D_surfaces" doi: 10.18563/m3.sf.284   state:published

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This contribution contains the 3D models described and figured in the following publication: Mourlam, M., Orliac, M. J. (2017), Protocetid (Cetacea, Artiodactyla) bullae and petrosals from the Middle Eocene locality of Kpogamé, Togo: new insights into the early history of cetacean hearing. Journal of Systematic Palaeontology https://doi.org/10.1080/14772019.2017.1328378
  

?Carolinacetus indet. UM KPG-M 164 View specimen

M3#132 left petrosal of ?Carolinacetus sp. from the locality of Kpogamé, Togo Type: "3D_surfaces" doi: 10.18563/m3.sf.132   state:published

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indet. indet. UM KPG-M 73 View specimen

	M3#133 labelled surface of the left petrosal Type: "3D_surfaces" doi: 10.18563/m3.sf.133   state:published	Download 3D surface file
	M3#134 left bullaof Protocetidae indeterminate from Kpogamé, Togo Type: "3D_surfaces" doi: 10.18563/m3.sf.134   state:published	Download 3D surface file
	M3#135 petrotympanic complex of Protocetidae indeterminate from Kpogamé, Togo Type: "3D_surfaces" doi: 10.18563/m3.sf.135   state:published	Download 3D surface file

?Carolinacetus indet. UM KPG-M 33 View specimen

M3#136 left auditory bulla of a juvenile specimen of ?Carolinacetus sp. from Kpogamé, Togo Type: "3D_surfaces" doi: 10.18563/m3.sf.136   state:published

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Togocetus traversei UM KPG-M 80 View specimen

M3#137 fragmentary right auditory bulla of Togocetus traversei from Kpogamé, Togo Type: "3D_surfaces" doi: 10.18563/m3.sf.137   state:published

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The present 3D Dataset contains 3D models of the cranium surface and of the bony labyrinth endocast of the stem bat Vielasia sigei. They are used by (Hand et al., 2023) to explore the phylogenetic position of this species, to infer its laryngeal echolocating capabilities, and to eventually discuss chiropteran evolution before the crown clade diversification. 

Vielasia sigei UM VIE-250 View specimen

	M3#1269 External surface of the cranium Type: "3D_surfaces" doi: 10.18563/m3.sf.1269   state:published	Download 3D surface file
	M3#1270 Virtual endocast of the right bony labyrinth Type: "3D_surfaces" doi: 10.18563/m3.sf.1270   state:published	Download 3D surface file

The present 3D Dataset contains the 3D model of the skull of the raoellid Indohyus indirae described in Patel et al. 2024.
  

Indohyus indirae RR 207 View specimen

M3#1259 dorsoventrally crushed skull Type: "3D_surfaces" doi: 10.18563/m3.sf.1259   state:published

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Indohyus indirae RR 601 View specimen

M3#1268 dorsoventrally crushed skull Type: "3D_surfaces" doi: 10.18563/m3.sf.1268   state:published

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